Publications

Recent Publications on Rodent Model

  1. Chattopadhyay, T., Maniyadath, B., Bagul, H. P., Chakraborty, A., Shukla, N., Budnar, S., Rajendran, A., Shukla, A., Kamat, S. S., Kolthur-Seetharam, U. (2020). Spatiotemporal gating of SIRT1 functions by O-GlcNAcylation is essential for liver metabolic switching and prevents hyperglycemia, PNAS 117, 6890-6900.

  2. Singh, S., Joshi, A., Kamat, S. S. (2020). Mapping the neuroanatomy of ABHD16A-ABHD12 & lysophosphatidylserines provides new insights into the pathophysiology of the human neurological disorder PHARC, Biochemistry 59 (24), 2299-2311.

  3. Kelkar, D. S., Ravikumar, G., Mehendale, N., Singh, S., Joshi, A., Sharma, A. K., Mhetre, A., Rajendan, A., Chakrapani, H., Kamat, S. S.* (2019). A chemical genetic screen identifies ABHD12 as an oxidized phosphatidylserine lipase, Nature Chemical Biology 15, 169-178.

  4. Maniyadath B, Chattopadhyay T, Verma S, Kumari S, Kulkarni P, Banerjee K, Lazarus A, Kokane SS, Shetty T, Anamika K, Kolthur-Seetharam U. (2019). Loss of Hepatic Oscillatory Fed microRNAs Abrogates Refed Transition and Causes Liver Dysfunctions, Cell Reports 26(8):2212-2226.

  5. Bhattacharjee AS, Konakamchi S, Turaev D, Vincis R, Nunes D, Dingankar AA, Spors H, Carleton A, Kuner T, Abraham NM* (2019). Similarity and strength of glomerular odor representations define neural metric of sniff-invariant discrimination time, Cell Reports 28(11): P2966-2978.E5        

  6. Rale, A., Shendye, N., Bodas, DS., Subhedar, N. and Ghose, A. (2017). CART neuropeptide modulates the extended amygdalar CeA-vBNST circuit to gate expression of innate fear. Psychoneuroendocrinology, 85, 69 -77   

Publications from External Users on Rodent Model

  1. Chattopadhyay T, Maniyadath B, Bagul HP, Chakraborty A, Shukla N, Budnar S, Rajendran A, Shukla A, Kamat SS, Kolthur-Seetharam U* (2020). Spatiotemporal gating of SIRT1 functions by O-GlcNAcylation is essential for liver metabolic switching and prevents hyperglycemia. PNAS. 117(12):6890-6900.  

  2. Shaw E, Talwadekar M, Mohan N, Aishwarya Acharya, Khatri S, Zeenat, Laxman S, Kolthur-Seetharam U*(2020). Anabolic SIRT4 exerts retrograde control over TORC1 signalling by glutamine sparing in the mitochondria. Mol. Cell. Biol. 3;40(2). pii: e00212-19

  3. Fanibunda S, Kolthur-Seetharam U* Vaidya VA* (2019). Serotonin regulates mitochondrial biogenesis and function in rodent cortical neurons via the 5-HT2A receptor and SIRT1-PGC-1α axis PNAS. 116(22):11028-1103 (* Co-corresponding)

  4. Maniyadath B, Chattopadhyay T, Verma S, Kumari S, Kulkarni P, Banerjee K, Lazarus A, Kokane SS, Shetty T, Anamika K, Kolthur-Seetharam U* (2019). Loss of Hepatic Oscillatory Fed microRNAs Abrogates Refed Transition and Causes Liver Dysfunctions. Cell Reports 26(8):2212-2226.e7

Recent Publications on Zebrafish Model

  1. Kundu T*, Dutta P*, Nagar D, Maiti S, Ghose A. (2021). Coupling of dynamic microtubules to F-actin by Fmn2 regulates chemotaxis of neuronal growth cones. Journal of Cell Science, 2021, 10.1242/jcs.252916

  2. Nagar D, James TK, Mishra R., Guha S, Ghose A. (2021). The formin Fmn2b is required for the development of an excitatory interneuron module in the zebrafish acoustic startle circuit. eNeuro, (in press)

  3. Indumathi Patta, Ayush Madhok, Satyajeet Khare, Kamalvishnu P Gottimukkala, Anjali Verma, Shilpi Giri, Vishal Dandewad, Jyoti Misra-Sen, Vasudevan Seshadri, Girdhari Lal, Jyoti Misra-Sen and Sanjeev Galande. (2020). Dynamic regulation of chromatin organizer SATB1 via TCR induced alternative promoter switch during T-cell development. Nucleic Acids Research, 48 (11):5873–5890.

  4. Khare S, Shetty A, Biradar R, Patta I, Sathe A, Reddy PC, Chen Z, Lahesmaa R and Galande S. (2019). NF-kB signaling and IL-4 signaling regulate SATB1 expression via alternative promoter usage during Th2 differentiation. Front. Immunol, 10:667.

  5. Kaniganti T, Deogade A, Maduskar A, Mukherjee A, Guru A, Subhedar N, Ghose A. (2018). Sensitivity of Olfactory Sensory Neurons to food cues is tuned to nutritional states by Neuropeptide Y signalling. bioRxiv, doi: 10.1101/573170.

Recent Publications on Fly Model

  1. Groth C, Vaid P, Khatpe A, Prashali N, Ahiya A, Andrejeva D, Chakladar M, Nagarkar S, Paul R, Kelkar D, Eichenlaub T, Herranz H, Sridhar TS, Cohen SM, Shashidhara LS (2020). Genome-Wide Screen for Context-Dependent Tumor Suppressors Identified Using in-Vivo Models for Neoplasia in Drosophila. G3 (Bethesda); 10(9):2999-3008.

  2. Nagarkar S, Wasnik R, Govada P, Cohen S, Shashidhara LS. (2020). Promoter Proximal Pausing Limits Tumorous Growth Induced by the Yki Transcription Factor in Drosophila. Genetics; 216(1):67-77. doi:10.1534/genetics.120.303419. Epub 2020 Jul 31.

  3. Khan S, Dilsha C, Shashidhara LS. (2020). Haltere development in D. melanogaster: implications for the evolution of appendage size, shape and function. Int J Dev Biol. 64(1-2-3):159-165. doi: 10.1387/ijdb.190133LS.

  4. Chowdhary S, Madan S, Tomer D, Mavrakis M, Rikhy R. (2020). Mitochondrial morphology and activity regulate furrow ingression and contractile ring dynamics in Drosophila cellularization. Mol Biol Cell. 5:mbcE20030177. doi: 10.1091/mbc.E20-03-0177.

  5. Sherlekar A, Mundhe G, Richa P, Dey B, Sharma S, Rikhy R. (2020). F-BAR domain protein Syndapin regulates actomyosin dynamics during apical cap remodeling in syncytial Drosophila embryos. J Cell Sci. 133(10):jcs235846. doi: 10.1242/jcs.235846. PMID: 32327556

  6. Dey B, Rikhy R. (2020). DE-cadherin and Myosin II balance regulates furrow length for onset of polygon shape in syncytial Drosophila embryos. J Cell Sci. 133(10):jcs240168. doi: 10.1242/jcs.240168. PMID: 32265269

  7. Basargekar A, Yogi S, Mushtaq Z, Deivasigamani S, Kumar V, Ratnaparkhi GS, Ratnaparkhi A. (2020). Drosophila Mon1 and Rab7 interact to regulate glutamate receptor levels at the neuromuscular junction. Int J Dev Biol. 64(4-5-6):289-297. doi: 10.1387/ijdb.190153ar.

  8. Pradhan SJ, Reddy PC, Smutny M, Sharma A, Sako K, Oak MS, Shah R, Pal M, Deshpande O, Tang Y, Mishra R, Deshpande G, Giraldez AJ, Sonawane M, Heisenberg CP, Galande S. (2020). Satb2 acts as a gatekeeper for major developmental transitions during early vertebrate embryogenesis. bioRxiv 2020.11.23.394171.

  9. Dhiman N, Shweta K, Tendulkar S, Deshpande G, Ratnaparkhi GS, Ratnaparkhi A. (2019). Drosophila Mon1 constitutes a novel node in the brain-gonad axis that is essential for female germline maturation. Development. Jul 10;146(13):dev166504. doi: 10.1242/dev.166504. PMID: 31292144.

  10. Chaplot K, Pimpale L, Ramalingam B, Deivasigamani S, Kamat SS, Ratnaparkhi GS. (2019). SOD1 activity threshold and TOR signaling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a Drosophila model of amyotrophic lateral sclerosis. Dis Model Mech. Feb 7;12(2):dmm033803.